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Ontology NameOntology IRIDescription
Application Layer Files  
eagle-i-app-def.owlhttp://eagle-i.org/ont/app/1.0/eagle-i-app-def.owlHolds definitions of all application specific annotation properties and individuals used exclusively to drive application functionality
ero-extended-app.owlhttp://eagle-i.org/ont/app/1.0/eagle-i-extended-app.owlRoot importer for full ontology import chain. Contains no actual ontology content.
ero-app.owlhttp://eagle-i.org/ont/app/1.0/eagle-i-core-app.owlHolds axioms on content of the ero.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
mp-imports-app.owlhttp://purl.obolibrary.org/obo/ero/dev/mp-imports-app.owlHolds axioms on content of the mp-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
uberon-import-app.owlhttp://eagle-i.org/ont/app/1.0/uberon-import-app.owlHolds axioms on content of the uberon-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
pato-imports-app.owlhttp://purl.obolibrary.org/obo/ero/dev/pato-imports-app.owlHolds axioms on content of the pato-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
disease-import-app.owlhttp://eagle-i.org/ont/app/1.0/mesh-disease-import-app.owlHolds axioms on content of the mesh-disease-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
go-imports-app.owlhttp://purl.obolibrary.org/obo/ero/dev/go-imports-app.owlHolds axioms on content of the go-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file)
Domain Layer Files  
ero.owlhttp://purl.obolibrary.org/obo/ero.owlCore file holding domain knowledge defined in ero namespace or MIREOTed from external ontolgoeis (exclusive of MREOTed content that lives in separate extended owl files (mp, uberon, pato, mesh/doid, go)
ero-extended.owlhttp://purl.obolibrary.org/obo/ero/ero-extended.owlRoot importer for all extended owl files (mp, uberon, pato, mesh/doid, go). Contains no actual ontology content.
mp-imports.owlhttp://purl.obolibrary.org/obo/ero/dev/mp-imports.owlExtended ontology file holding MIREOTed content from the Mammalian Phenotype Ontology. Rooted at 'mammalian phenotype' class.
uberon-import.owlhttp://purl.obolibrary.org/obo/ero/dev/uberon-import.owlExtended ontology file holding MIREOTed content from the Uberon Ontology. Has two root classes: 'anatomical entity' and 'life cycle stage'.
pato-imports.owlhttp://purl.obolibrary.org/obo/ero/dev/pato-imports.owlExtended ontology file holding MIREOTed content from the PATO Phenotype and Trait Ontology. Rooted at the 'PATO quality' class.
disease-import.owlhttp://purl.obolibrary.org/obo/ero/dev/mesh-disease-import.owlExtended ontology file holding MIREOTed content from the DOID Disease Ontology. Named as mesh-disease because we formerly we took disease classes from MeSH, but have since replaced with DOID content. Rooted at the 'disease (doid)' class.
go-imports.owlhttp://purl.obolibrary.org/obo/ero/dev/go-imports.owlExtended ontology file holding MIREOTed content from the Gene Ontology. Rooted at the 'biological_process' class.
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