| Ontology Name | Ontology IRI | Description |
|---|---|---|
| Application Layer Files | ||
| eagle-i-app-def.owl | http://eagle-i.org/ont/app/1.0/eagle-i-app-def.owl | Holds definitions of all application specific annotation properties and individuals used exclusively to drive application functionality |
| ero-extended-app.owl | http://eagle-i.org/ont/app/1.0/ero-extended-app.owl | Root importer for full ontology import chain. Contains no actual ontology content. |
| ero-app.owl | http://eagle-i.org/ont/app/1.0/ero-app.owl | Holds axioms on content of the ero.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| mp-imports-app.owl | http://purl.obolibrary.org/obo/ero/dev/mp-imports-app.owl | Holds axioms on content of the mp-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| uberon-import-app.owl | http://eagle-i.org/ont/app/1.0/uberon-import-app.owl | Holds axioms on content of the uberon-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| pato-imports-app.owl | http://purl.obolibrary.org/obo/ero/dev/pato-imports-app.owl | Holds axioms on content of the pato-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| disease-import-app.owl | http://eagle-i.org/ont/app/1.0/disease-import-app.owl | Holds axioms on content of the disease-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| go-imports-app.owl | http://purl.obolibrary.org/obo/ero/dev/go-imports-app.owl | Holds axioms on content of the go-import.owl file for consumption by application (primarily annotation axioms using terms defined in app-def.owl file) |
| Domain Layer Files | ||
| ero.owl | http://purl.obolibrary.org/obo/ero.owl | Core file holding domain knowledge defined in ERO namespace or MIREOTed from external ontologies (exclusive of MREOTed content that lives in separate extended owl files (MP, UBERON, PATO, DOID, GO) |
| ero-extended.owl | http://purl.obolibrary.org/obo/ero/ero-extended.owl | Root importer for all extended owl files (MP, UBERON, PATO, DOID, GO). Contains no actual ontology content. |
| mp-imports.owl | http://purl.obolibrary.org/obo/ero/dev/mp-imports.owl | Extended ontology file holding MIREOTed content from the Mammalian Phenotype Ontology. Rooted at 'mammalian phenotype' class. |
| uberon-import.owl | http://purl.obolibrary.org/obo/ero/dev/uberon-import.owl | Extended ontology file holding MIREOTed content from the Uberon Ontology. Has two root classes: 'anatomical entity' and 'life cycle stage'. |
| pato-imports.owl | http://purl.obolibrary.org/obo/ero/dev/pato-imports.owl | Extended ontology file holding MIREOTed content from the PATO Phenotype and Trait Ontology. Rooted at the 'PATO quality' class. |
| disease-import.owl | http://purl.obolibrary.org/obo/ero/dev/disease-import.owl | Extended ontology file holding MIREOTed content from the DOID Disease Ontology. Formerly named as mesh-disease because we formerly we took disease classes from MeSH, but have since replaced with DOID content. Rooted at the 'disease (doid)' class. |
| go-imports.owl | http://purl.obolibrary.org/obo/ero/dev/go-imports.owl | Extended ontology file holding MIREOTed content from the Gene Ontology. Rooted at the 'biological_process' class. |
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