From Sophia_Cheng at hms.harvard.edu Fri Feb 17 14:18:56 2017 From: Sophia_Cheng at hms.harvard.edu (Cheng, Sophia K) Date: Fri, 17 Feb 2017 19:18:56 +0000 Subject: [Eagle-i-admins] java.util.Map$Entry cannot be resolved error Message-ID: Dear eagle-i-admins, I am having some difficulties with diagnosing an error for a fellow eagle-i installation and was wondering if any of you have encountered the following error when installing the eagle-i repository. Specifically, when running the finish-install.sh for eagle-i-repository-dist-4.3.0-dist: An error occurred at line: [1] in the generated java file: [/usr/share/tomcat/work/Catalina/localhost/_/org/apache/jsp/repository/admin/error_jsp.java] The type java.util.Map$Entry cannot be resolved. It is indirectly referenced from required .class files Stacktrace: at org.apache.jasper.compiler.DefaultErrorHandler.javacError(DefaultErrorHandler.java:103) at org.apache.jasper.compiler.ErrorDispatcher.javacError(ErrorDispatcher.java:366) at org.apache.jasper.compiler.JDTCompiler.generateClass(JDTCompiler.java:471) at org.apache.jasper.compiler.Compiler.compile(Compiler.java:379) at org.apache.jasper.compiler.Compiler.compile(Compiler.java:354) at org.apache.jasper.compiler.Compiler.compile(Compiler.java:341) at org.apache.jasper.JspCompilationContext.compile(JspCompilationContext.java:662) at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:364) at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:395) at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:339) at javax.servlet.http.HttpServlet.service(HttpServlet.java:731) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:747) at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:487) at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:410) at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:337) at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:479) at org.apache.catalina.core.StandardHostValve.status(StandardHostValve.java:341) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:206) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:956) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:442) at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1083) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:640) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1756) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1715) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) at java.lang.Thread.run(Thread.java:745) The environment that this is being run on is: Red Hat Enterprise Linux Server release 6.8 (Santiago) Java version "1.8.0_66" Apache Tomcat/7.0.72 I?m a bit stumped as this is very similar to our environment: Server version: Apache Tomcat/7.0.39 Server built: Mar 22 2013 12:37:24 Server number: 7.0.39.0 OS Name: Linux OS Version: 2.6.32-642.6.2.el6.x86_64 Architecture: amd64 JVM Version: 1.8.0_66-b17 JVM Vendor: Oracle Corporation Thank you, Sophia -------------- next part -------------- An HTML attachment was scrubbed... URL: From Sukdith.Punjasthitkul at dartmouth.edu Tue Feb 21 00:36:23 2017 From: Sukdith.Punjasthitkul at dartmouth.edu (Sukdith Punjasthitkul) Date: Tue, 21 Feb 2017 05:36:23 +0000 Subject: [Eagle-i-admins] java.util.Map$Entry cannot be resolved error In-Reply-To: References: Message-ID: <7C8866AE-8074-46D1-884F-22B59AAC9A6C@dartmouth.edu> Hi Sophia, Have you tried testing with same version JVM? I recall you and I troubleshooting something similar when we were updating our eagle-i node and determined that it was the particular Java build we were using (in our case, it was solr 4.10.3 not playing well with java 1.7.0_25, but java 1.7.0_71 worked). --sukie-- > On Feb 17, 2017, at 2:18 PM, Cheng, Sophia K wrote: > > Dear eagle-i-admins, > > I am having some difficulties with diagnosing an error for a fellow eagle-i installation and was wondering if any of you have encountered the following error when installing the eagle-i repository. Specifically, when running the finish-install.sh for eagle-i-repository-dist-4.3.0-dist: > > An error occurred at line: [1] in the generated java file: [/usr/share/tomcat/work/Catalina/localhost/_/org/apache/jsp/repository/admin/error_jsp.java] > The type java.util.Map$Entry cannot be resolved. It is indirectly referenced from required .class files > > Stacktrace: > at org.apache.jasper.compiler.DefaultErrorHandler.javacError(DefaultErrorHandler.java:103) > at org.apache.jasper.compiler.ErrorDispatcher.javacError(ErrorDispatcher.java:366) > at org.apache.jasper.compiler.JDTCompiler.generateClass(JDTCompiler.java:471) > at org.apache.jasper.compiler.Compiler.compile(Compiler.java:379) > at org.apache.jasper.compiler.Compiler.compile(Compiler.java:354) > at org.apache.jasper.compiler.Compiler.compile(Compiler.java:341) > at org.apache.jasper.JspCompilationContext.compile(JspCompilationContext.java:662) > at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:364) > at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:395) > at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:339) > at javax.servlet.http.HttpServlet.service(HttpServlet.java:731) > at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303) > at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) > at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:747) > at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:487) > at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:410) > at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:337) > at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:479) > at org.apache.catalina.core.StandardHostValve.status(StandardHostValve.java:341) > at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:206) > at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103) > at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:956) > at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116) > at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:442) > at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1083) > at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:640) > at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1756) > at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1715) > at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) > at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) > at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) > at java.lang.Thread.run(Thread.java:745) > > The environment that this is being run on is: > > Red Hat Enterprise Linux Server release 6.8 (Santiago) > Java version "1.8.0_66" > Apache Tomcat/7.0.72 > > I?m a bit stumped as this is very similar to our environment: > Server version: Apache Tomcat/7.0.39 > Server built: Mar 22 2013 12:37:24 > Server number: 7.0.39.0 > OS Name: Linux > OS Version: 2.6.32-642.6.2.el6.x86_64 > Architecture: amd64 > JVM Version: 1.8.0_66-b17 > JVM Vendor: Oracle Corporation > > Thank you, > Sophia > _______________________________________________ > Eagle-i-admins mailing list > Eagle-i-admins at open.med.harvard.edu > https://open.med.harvard.edu/mailman/listinfo/eagle-i-admins