[Eagle-i-admins] New process and data migration issues & clarification of properties [2.0-MS2.14]

[Faith Coldren]

We aren't running java 1.6. We have the following configuration:

java version "1.7.0_05-icedtea"
OpenJDK Runtime Environment (rhel-2.2.1.el6_3.3-x86_64)
OpenJDK 64-Bit Server VM (build 23.0-b21, mixed mode)


On Thu, Aug 8, 2013 at 3:07 PM, Cheng, Sophia
<Sophia_Cheng at hms.harvard.edu>wrote:

> Hello everyone,
>
> This is a bit of a shot in the dark, but has anyone else running java 1.6
> with OpenJDK as the Java?  If so, have you been able to run the migration
> scripts?
>
> Sincerely,
> Sophia
>
> From: <Tolmie>, David A <dtolmie at fhcrc.org>
> Date: Thursday, August 8, 2013 1:21 PM
> To: "eagle-i-admins at open.med.harvard.edu" <
> eagle-i-admins at open.med.harvard.edu>, "ross.davis at Vanderbilt.Edu" <
> ross.davis at Vanderbilt.Edu>, "angel at itmat.upenn.edu" <angel at itmat.upenn.edu>,
> "fcoldren at mail.med.upenn.edu" <fcoldren at mail.med.upenn.edu>, "
> sukie at dartmouth.edu" <sukie at dartmouth.edu>
> Cc: "Neiman, David" <David_Neiman at hms.harvard.edu>, "Cole, Julian C" <
> Julian_Cole at hms.harvard.edu>, "Ciriello, Marc" <
> Marc_Ciriello at hms.harvard.edu>
> Subject: Re: [Eagle-i-admins] New process and data migration issues &
> clarification of properties [2.0-MS2.14]
>
> Hi folks,
>
> I'm back to trying to upgrade eagle-I, and I'm receiving the same kind of
> output as before when running the data migration script.  See attached.
>  The script claims to have run successfully, but shows command usage info
> as if underlying commands were not called correctly.  Nothing was written
> to any of the logs.
>
> I'm doing this with the repository and data migrations tools from
> 2.0-MS2.16 this time.  I made certain there were no old instances of
> the eagle-i-datatools-datamanagement.jar before downloading the jar for the
> newest release.
>
> Any thoughts or suggestions?
>
> Thanks,
>
> -Dave
>
> ------------------------------
>
> David Tolmie****
>
> *Systems Librarian**                ***
>
> *Arnold Library | Fred Hutchinson Cancer Research Center | Seattle, WA*
>
> *dtolmie at fhcrc.org  |  tel 206.667.6852 |  fax 206.667.4737***
>
> [image: Description: Description: Description: Description: AL-Logo-color]<http://library.fhcrc.org/>
> ****
>
> ** **
>
> From: <Cheng>, "Cheng, Sophia" <Sophia_Cheng at hms.harvard.edu>
> Reply-To: "eagle-i-admins at open.med.harvard.edu" <
> eagle-i-admins at open.med.harvard.edu>
> Date: Tuesday, July 23, 2013 4:51 PM
> To: David Tolmie <dtolmie at fhcrc.org>, "ross.davis at Vanderbilt.Edu" <
> ross.davis at Vanderbilt.Edu>, "angel at itmat.upenn.edu" <angel at itmat.upenn.edu>,
> "fcoldren at mail.med.upenn.edu" <fcoldren at mail.med.upenn.edu>, "
> sukie at dartmouth.edu" <sukie at dartmouth.edu>
> Cc: "Ciriello, Marc" <Marc_Ciriello at hms.harvard.edu>, "Bourges, Daniela" <
> Daniela_Bourges at hms.harvard.edu>, "Cole, Julian C" <
> Julian_Cole at hms.harvard.edu>, "Neiman, David" <
> David_Neiman at hms.harvard.edu>, "eagle-i-admins at open.med.harvard.edu" <
> eagle-i-admins at open.med.harvard.edu>
> Subject: New process and data migration issues & clarification of
> properties [2.0-MS2.14]
>
> Now, regarding some of the issues that have been encountered:
> (1) Some of you have reported having issues running the data-migration.sh
> for the latest release, 2.0-MS2.14.  This issue manifests with notification
> of incorrect/missing parameters during the execution of the script, but the
> script does not fail.  The output looks similar to the attached file.  I
> have been unable to reproduce the error using the files that were mentioned
> in the initial email:
> Datamangement Toolkit -
> http://infra.search.eagle-i.net:8081/nexus/content/repositories/releases/org/eagle-i/eagle-i-datatools-datamanagement/
>
> Repository -
> http://infra.search.eagle-i.net:8081/nexus/content/repositories/releases/org/eagle-i/eagle-i-repository-dist/
>
>
> Not everyone has run into this problem, so I'm wondering if I could ask
> those of you who have had problems to remove your existing
> eagle-i-datatools-datamanagement.jar, re-download the jar and try the
> script again.
>
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